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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs113822514 chr2:86890742 A/G 0 403 15.83 13.23 6.38 KM Plot
LGG rs113839205 chr18:33449780 G/GT 8.55E-5 405 15.93 14.77 8.07 KM Plot
LGG rs113868265 chr16:67549157 C/G 0.000119 407 15.37 14.47 19.2 KM Plot
LGG rs113884219 chr7:56003621 C/T 1.53E-10 405 15.3 15.93 7.8 KM Plot
LGG rs113885326 chr6:36013511 G/T 1.01E-9 406 15.57 15.17 6.15 KM Plot
LGG rs113935319 chr8:1735200 T/A 1.66E-6 395 15.35 15.57 5.42 KM Plot
LGG rs113941131 chr6:36010900 C/CA 2.28E-9 392 15.35 15.18 6.15 KM Plot
LGG rs113946892 chr6:139261711 A/G 2.18E-9 404 15.18 17.2 8.03 KM Plot
LGG rs113980265 chr5:156003473 C/T 9.21E-5 402 14.93 16.03 11.63 KM Plot
LGG rs113988852 chr7:55940944 T/C 6.73E-5 405 15.25 15.37 5.88 KM Plot
LGG rs114048127 chr2:17872711 G/T 1.44E-8 406 15.3 15.67 7.33 KM Plot
LGG rs114134107 chr4:84428954 C/T 1.11E-15 397 14.85 18.13 5.17 KM Plot
LGG rs114297298 chr9:95447282 C/T 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs11436754 chr5:92907569 A/AT 6.12E-5 392 15.17 15.13 25.62 KM Plot
LGG rs11437954 chr6:46928525 T/TA 1.92E-5 401 15.13 16.1 12.5 KM Plot